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  • Top cofit genes for PP_1106 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: mRNA 3-end processing factor
    KEGG: putative mRNA 3-end processing factor

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3790 diaminopimelate epimerase no 0.29
    2 PP_3788 putative Non-ribosomal peptide synthetase no 0.25
    3 PP_0506 putative ABC efflux transporter, permease protein no 0.24
    4 PP_3787 conserved protein of unknown function no 0.24
    5 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.24
    6 PP_3786 aminotransferase no 0.22
    7 PP_3376 putative phosphonate dehydrogenase 0.23 0.21
    8 PP_5061 Choline transporter no 0.20
    9 PP_3244 Magnesium transporter, MgtC family no 0.20
    10 PP_3776 putative permease (RarD protein) no 0.19
    11 PP_5334 conserved membrane protein of unknown function no 0.19
    12 PP_2496 conserved protein of unknown function no 0.19
    13 PP_1792 Glycosyl transferase, group 2 family protein no 0.19
    14 PP_1109 Transcriptional regulator, GntR family no 0.19
    15 PP_0662 putative Threonine synthase no 0.19
    16 PP_5453 conserved protein of unknown function no 0.19
    17 PP_0279 conserved protein of unknown function no 0.18
    18 PP_3962 conserved protein of unknown function 0.20 0.18
    19 PP_3183 SCO1/SenC family protein/cytochrome c no 0.18
    20 PP_2640 Acetyltransferase, GNAT family no 0.18

    Or look for negative cofitness