Top cofit genes for PP_1105 from Pseudomonas putida KT2440

putative DNA ligase, ATP-dependent
SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
KEGG: DNA ligase (ATP)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	0.23	0.18
2	PP_2393		DNA polymerase II	0.42	0.17
3	PP_3857		conserved protein of unknown function	no	0.17
4	PP_5539		conserved exported protein of unknown function	no	0.16
5	PP_4145		Membrane-bound lytic murein transglycosylase D	0.32	0.16
6	PP_1637		Transcriptional regulator, LysR family	no	0.15
7	PP_5270		D-amino-acid:quinone oxidoreductase (deaminating)	no	0.15
8	PP_0340		Glutamate-ammonia-ligase adenylyltransferase	no	0.14
9	PP_1542		conserved protein of unknown function	no	0.14
10	PP_0576		putative Lipoprotein	0.25	0.14
11	PP_2949		putative permease	no	0.14
12	PP_1301		quality control serine endoprotease DegS	0.32	0.14
13	PP_2848		urease accessory protein	no	0.13
14	PP_2072		Transcriptional regulator, AraC family	no	0.13
15	PP_1309		conserved exported protein of unknown function	no	0.13
16	PP_3769		conserved exported protein of unknown function	no	0.13
17	PP_3783		syringomycin biosynthesis enzyme 2	no	0.13
18	PP_4404		dihydrolipoyl dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex	0.17	0.13
19	PP_5217		Polyphosphate kinase	0.26	0.12
20	PP_5623		conserved membrane protein of unknown function	no	0.12

Or look for negative cofitness