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  • Top cofit genes for PP_1104 from Pseudomonas putida KT2440

    AotO-related protein
    SEED: Succinylglutamate desuccinylase/aspartoacylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) no 0.25
    2 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.42 0.24
    3 PP_1654 cysteine synthase B no 0.21
    4 PP_1811 UDP-N-acetylglucosamine-2-epimerase no 0.20
    5 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.20
    6 PP_1291 PhoH family protein 0.68 0.20
    7 PP_4246 Periplasmic binding protein no 0.19
    8 PP_2517 porin-like protein no 0.18
    9 PP_0144 Metalloprotease, insulinase family no 0.18
    10 PP_1229 putrescine permease 0.50 0.18
    11 PP_4270 conserved exported protein of unknown function no 0.18
    12 PP_1444 quinoprotein glucose dehydrogenase 0.12 0.18
    13 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.18
    14 PP_4924 Serine protease, subtilase family no 0.18
    15 PP_2231 putative permease of the drug/metabolite transporter (DMT) superfamily no 0.17
    16 PP_4693 RNA polymerase-binding transcription factor DksA 0.35 0.17
    17 PP_5060 conserved protein of unknown function no 0.17
    18 PP_0611 Type IV pili biogenesis protein PilE 0.63 0.17
    19 PP_4219 non-ribosomal peptide synthetase no 0.17
    20 PP_3477 Putative secretion type II protein related to protein G no 0.17

    Or look for negative cofitness