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  • Top cofit genes for PP_1077 from Pseudomonas putida KT2440

    Cys-tRNAPro deacylase
    SEED: Cys-tRNA(Pro) deacylase YbaK
    KEGG: putative transcription regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1075 glycerol kinase 0.36 0.23
    2 PP_1626 DNA mismatch repair protein MutS 0.31 0.20
    3 PP_1789 Hydrolase, haloacid dehalogenase-like family no 0.20
    4 PP_2148 transcription-repair coupling factor 0.23 0.20
    5 PP_0540 conserved inner membrane protein no 0.20
    6 PP_3627 conserved protein of unknown function no 0.18
    7 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent no 0.18
    8 PP_5283 periplasmic dipeptide transport protein 0.31 0.18
    9 PP_5058 Carboxy-terminal-processing protease no 0.18
    10 PP_1774 conserved exported protein of unknown function no 0.17
    11 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.42 0.17
    12 PP_4570 conserved protein of unknown function 0.34 0.17
    13 PP_1236 putative Glycine cleavage system transcriptional repressor no 0.17
    14 PP_1627 conserved protein of unknown function no 0.17
    15 PP_3769 conserved exported protein of unknown function no 0.16
    16 PP_1076 aquaglyceroporin 0.61 0.16
    17 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.16
    18 PP_t49 tRNA-Met no 0.16
    19 PP_4171 conserved exported protein of unknown function 0.58 0.16
    20 PP_3179 Transcriptional regulator, LysR family no 0.16

    Or look for negative cofitness