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  • Top cofit genes for PP_1065 from Pseudomonas putida KT2440

    membrane protein required for efficient alginate biosynthesis
    SEED: Membrane protein glpM
    KEGG: membrane protein GlpM

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1067 Sensor histidine kinase 0.18 0.20
    2 PP_4570 conserved protein of unknown function no 0.19
    3 PP_3197 Glyoxalase family protein no 0.19
    4 PP_1301 quality control serine endoprotease DegS no 0.18
    5 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.18
    6 PP_2428 Probable sugar efflux transporter no 0.17
    7 PP_5200 proline aminopeptidase P II no 0.17
    8 PP_3627 conserved protein of unknown function no 0.17
    9 PP_2637 endo-1,4-D-glucanase subunit of cellulose synthase 0.48 0.17
    10 PP_5284 UPF0758 protein PP_5284 no 0.17
    11 PP_4971 putative Outer membrane-bound lytic murein transglycolase A no 0.17
    12 PP_1071 glutamate / aspartate ABC transporter - periplasmic binding protein 0.23 0.17
    13 PP_2030 conserved protein of unknown function 0.13 0.17
    14 PP_1798 Outer membrane efflux protein 0.21 0.17
    15 PP_1627 conserved protein of unknown function 0.60 0.17
    16 PP_2376 Esterified fatty acid cis/trans isomerase no 0.17
    17 PP_0540 conserved inner membrane protein 0.49 0.16
    18 PP_4742 Type I restriction-modification system, S subunit no 0.16
    19 PP_2425 putative transcriptional regulator, AraC family 0.33 0.16
    20 PP_4450 Phosphoglycerate mutase family protein no 0.16

    Or look for negative cofitness