Top cofit genes for PP_1063 from Pseudomonas putida KT2440

DNA-binding transcriptional regulator, homocysteine-binding
SEED: Transcriptional activator MetR
KEGG: LysR family transcriptional regulator, regulator for metE and metH

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3790		diaminopimelate epimerase	no	0.67
2	PP_3788		putative Non-ribosomal peptide synthetase	no	0.66
3	PP_3786		aminotransferase	no	0.60
4	PP_3787		conserved protein of unknown function	no	0.58
5	PP_1348		putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase	0.20	0.52
6	PP_4922		Phosphomethylpyrimidine synthase	0.84	0.50
7	PP_3376		putative phosphonate dehydrogenase	no	0.50
8	PP_4684		conserved protein of unknown function with kinase-like domain	0.21	0.49
9	PP_2714		Sensor histidine kinase	0.77	0.47
10	PP_2388		Transporter, LysE family	no	0.47
11	PP_0506		putative ABC efflux transporter, permease protein	no	0.46
12	PP_1109		Transcriptional regulator, GntR family	0.53	0.45
13	PP_1110		serine acetyltransferase	no	0.44
14	PP_1111		putative Synthetase	no	0.44
15	PP_3776		putative permease (RarD protein)	no	0.41
16	PP_3789		putative Efflux transporter	no	0.41
17	PP_3443		putative glyceraldehyde-3-phosphate dehydrogenase	0.56	0.39
18	PP_2390		Transcriptional regulator, LysR family	no	0.39
19	PP_5104		thiazole synthase	0.79	0.39
20	PP_0120		putative zinc ABC transporter	0.78	0.39

Or look for negative cofitness