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  • Top cofit genes for PP_1061 from Pseudomonas putida KT2440

    putative ATP-dependent DNA helicase lhr
    SEED: FIG003033: Helicase domain protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5715 protein of unknown function no 0.21
    2 PP_1824 Smr domain protein 0.56 0.21
    3 PP_4999 dihydroorotase-like protein no 0.20
    4 PP_2065 Multidrug efflux RND transporter no 0.20
    5 PP_5125 Formamidopyrimidine-DNA glycosylase 0.48 0.19
    6 PP_0691 Glutamate 5-kinase no 0.18
    7 PP_2036 putative 4-hydroxy-tetrahydrodipicolinate synthase 0.27 0.18
    8 PP_3432 conserved exported protein of unknown function no 0.18
    9 PP_1254 XenA no 0.18
    10 PP_1275 conserved protein of unknown function no 0.18
    11 PP_0534 putative Transcriptional regulator PfeR no 0.18
    12 PP_0227 periplasmic cystine-binding protein 0.32 0.17
    13 PP_4237 periplasmic protein disulfide isomerase 0.27 0.17
    14 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD no 0.17
    15 PP_1847 putative TonB-dependent ferric siderophore receptor no 0.17
    16 PP_5670 conserved protein of unknown function 0.31 0.17
    17 PP_0740 Transcriptional regulator, MerR family no 0.17
    18 PP_2757 putative Sugar-binding protein no 0.17
    19 PP_1882 conserved membrane protein of unknown function no 0.17
    20 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily 0.31 0.17

    Or look for negative cofitness