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  • Top cofit genes for PP_1053 from Pseudomonas putida KT2440

    Type II secretion pathway protein XcpY
    SEED: General secretion pathway protein L (Pullulanase secretion protein pulL)
    KEGG: general secretion pathway protein L

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5500 protein of unknown function no 0.16
    2 PP_3182 GGDEF domain protein no 0.15
    3 PP_3639 Alkylhydroperoxidase AhpD domain protein no 0.15
    4 PP_2560 alkaline protease secretion transporter ATP-binding protein no 0.14
    5 PP_4231 putative Xanthine dehydrogenase accessory factor no 0.14
    6 PP_4019 DNA topoisomerase III no 0.14
    7 PP_5460 conserved membrane protein of unknown function no 0.14
    8 PP_0769 Sensor histidine kinase no 0.14
    9 PP_3603 Transcriptional regulator, GntR family no 0.13
    10 PP_0863 conserved protein of unknown function no 0.13
    11 PP_3508 Protein CobW no 0.13
    12 PP_1666 conserved exported protein of unknown function no 0.13
    13 PP_2718 arsenic resistance transcriptional regulator no 0.13
    14 PP_4630 Transcriptional regulator, MerR family no 0.13
    15 PP_5193 glycine cleavage system H protein 2 no 0.13
    16 PP_4829 putative precorrin-3B synthase no 0.13
    17 PP_1676 subunit of adenosylcobinamide-phosphate synthase beta component no 0.13
    18 PP_0274 putative transcriptional regulator containing HTH domain no 0.13
    19 PP_1351 putative 2-dehydropantoate 2-reductase no 0.12
    20 PP_3512 conserved membrane protein of unknown function no 0.12

    Or look for negative cofitness