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  • Top cofit genes for PP_1046 from Pseudomonas putida KT2440

    Type II secretion pathway protein XcpQ
    SEED: General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD)
    KEGG: general secretion pathway protein D

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3205 Fumarylacetoacetate hydrolase family protein no 0.18
    2 PP_5481 conserved protein of unknown function no 0.18
    3 PP_4911 conserved protein of unknown function no 0.17
    4 PP_1875 Sensor histidine kinase/response regulator no 0.17
    5 PP_5143 conserved membrane protein of unknown function no 0.17
    6 PP_1869 4,5-DOPA-dioxygenase no 0.17
    7 PP_3624 conserved exported protein of unknown function no 0.16
    8 PP_0561 thiol/disulfide interchange protein 1 no 0.16
    9 PP_2269 putative N-acetylmuramoyl-L-alanine amidase no 0.16
    10 PP_3340 putative TonB-dependent receptor no 0.15
    11 PP_1267 toxin endoribonuclease of toxin antitoxin system SohB(PrlF)-YhaV no 0.15
    12 PP_2533 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.15
    13 PP_0860 putative Sulfite reductase, flavoprotein component no 0.15
    14 PP_3573 putative Monooxygenase no 0.15
    15 PP_2097 Sensory box protein no 0.15
    16 PP_0676 putative Transcription elongation factor 0.34 0.15
    17 PP_5240 Response regulator no 0.15
    18 PP_4510 conserved protein of unknown function no 0.15
    19 PP_3744 transcriptional dual regulator GlcC-Glycolate no 0.15
    20 PP_1301 quality control serine endoprotease DegS no 0.15

    Or look for negative cofitness