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  • Top cofit genes for PP_1027 from Pseudomonas putida KT2440

    Exodeoxyribonuclease 7 large subunit
    SEED: Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
    KEGG: exodeoxyribonuclease VII large subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4065 methylcrotonyl-CoA carboxylase biotin-containing subunit beta no 0.23
    2 PP_4067 methylcrotonyl-CoA carboxylase biotin-containing subunit alpha 0.52 0.22
    3 PP_4064 isovaleryl-CoA dehydrogenase no 0.21
    4 PP_0927 aromatic amino acid transport protein no 0.21
    5 PP_3587 lipid hydroperoxide peroxidase no 0.20
    6 PP_2971 transposase no 0.20
    7 PP_3614 conserved membrane protein of unknown function no 0.20
    8 PP_2611 membrane protein of unknown function no 0.18
    9 PP_0949 putative ATP-binding protein UPF0042 0.77 0.17
    10 PP_5310 junction-specific ATP-dependent DNA helicase 0.74 0.17
    11 PP_3456 Multidrug resistance protein MexB 0.73 0.17
    12 PP_1719 Tail-specific protease prc 0.48 0.17
    13 PP_4063 putative Long-chain-fatty-acid-CoA ligase 0.27 0.16
    14 PP_3123 acetoacetyl CoA-transferase (subunit B) 0.19 0.16
    15 PP_0111 Electron transport protein SCO1/SenC 0.41 0.16
    16 PP_3916 conserved protein of unknown function no 0.16
    17 PP_4902 Oligoribonuclease 0.32 0.16
    18 PP_4131 NADH-quinone oxidoreductase subunit N no 0.15
    19 PP_3622 vanillin dehydrogenase, iorB-like component (from data) no 0.15
    20 PP_1550 Transcriptional regulator, Cro/CI family no 0.15

    Or look for negative cofitness