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  • Top cofit genes for PP_1017 from Pseudomonas putida KT2440

    mannose/glucose ABC transporter, permease protein
    SEED: Glucose ABC transport system, inner membrane component 2
    KEGG: multiple sugar transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1016 mannose/glucose ABC transporter, permease protein 0.99 0.85
    2 PP_1015 mannose/glucose ABC transporter, glucose-binding periplasmic protein 0.99 0.84
    3 PP_1011 glucokinase 0.98 0.81
    4 PP_1018 mannose/glucose ABC transporter - ATP binding subunit 0.99 0.80
    5 PP_1012 DNA-binding response regulator 0.97 0.79
    6 PP_1013 Sensor histidine kinase 0.99 0.72
    7 PP_3417 D-gluconate transporter 0.91 0.49
    8 PP_1014 aldose-ketose isomerase 0.36 0.48
    9 PP_5347 pyruvate carboxylase subunit A 0.63 0.39
    10 PP_1009 glyceraldehyde-3-phosphate dehydrogenase 0.59 0.38
    11 PP_5348 Transcriptional regulator, LysR family 0.68 0.38
    12 PP_5346 pyruvate carboxylase subunit B 0.66 0.38
    13 PP_2168 Transaldolase 0.68 0.37
    14 PP_0362 Biotin synthase 0.53 0.33
    15 PP_1444 quinoprotein glucose dehydrogenase 0.48 0.33
    16 PP_1022 glucose 6-phosphate-1-dehydrogenase 0.99 0.33
    17 PP_0363 8-amino-7-oxononanoate synthase 0.32 0.31
    18 PP_0364 pimeloyl-[acp] methyl ester esterase 0.40 0.30
    19 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.38 0.30
    20 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase 0.29 0.30

    Or look for negative cofitness