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  • Top cofit genes for PP_1013 from Pseudomonas putida KT2440

    Sensor histidine kinase
    SEED: Integral membrane sensor signal transduction histidine kinase (EC 2.7.13.3), glucose catabolism cluster

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1015 mannose/glucose ABC transporter, glucose-binding periplasmic protein 0.99 0.78
    2 PP_1016 mannose/glucose ABC transporter, permease protein 0.99 0.77
    3 PP_1018 mannose/glucose ABC transporter - ATP binding subunit 0.99 0.73
    4 PP_1017 mannose/glucose ABC transporter, permease protein 0.99 0.72
    5 PP_1011 glucokinase 0.98 0.72
    6 PP_1012 DNA-binding response regulator 0.98 0.69
    7 PP_1014 aldose-ketose isomerase 0.56 0.53
    8 PP_3417 D-gluconate transporter 0.64 0.47
    9 PP_1022 glucose 6-phosphate-1-dehydrogenase 0.98 0.36
    10 PP_5347 pyruvate carboxylase subunit A 0.44 0.34
    11 PP_1009 glyceraldehyde-3-phosphate dehydrogenase 0.54 0.34
    12 PP_5348 Transcriptional regulator, LysR family 0.43 0.33
    13 PP_5346 pyruvate carboxylase subunit B 0.45 0.33
    14 PP_1019 carbohydrate-selective porin 0.41 0.33
    15 PP_2168 Transaldolase 0.66 0.32
    16 PP_1444 quinoprotein glucose dehydrogenase 0.44 0.29
    17 PP_0363 8-amino-7-oxononanoate synthase 0.27 0.29
    18 PP_0362 Biotin synthase 0.60 0.28
    19 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.27 0.28
    20 PP_4044 conserved protein of unknown function no 0.27

    Or look for negative cofitness