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  • Top cofit genes for PP_0992 from Pseudomonas putida KT2440

    conserved protein of unknown function, UPF0276 family
    SEED: Uncharacterized protein conserved in bacteria, NMA0228-like
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3719 Putrescine-binding periplasmic protein no 0.25
    2 PP_0994 putative RNA polymerase sigma factor no 0.18
    3 PP_3763 putative CobF protein no 0.17
    4 PP_1750 asparagine synthetase 0.70 0.17
    5 PP_1879 conserved protein of unknown function no 0.17
    6 PP_3208 Oxidoreductase, Pdr/VanB family no 0.17
    7 PP_0870 putative Glycine betaine/carnitine/choline ABC transporter, periplasmic binding protein no 0.17
    8 PP_0633 Type 4 fimbrial assembly protein PilC no 0.17
    9 PP_0217 delta-9 fatty acid desaturase no 0.17
    10 PP_5714 conserved protein of unknown function no 0.17
    11 PP_3267 putative Clp protease no 0.17
    12 PP_1504 conserved protein of unknown function no 0.16
    13 PP_3451 conserved exported protein of unknown function no 0.16
    14 PP_1882 conserved membrane protein of unknown function no 0.16
    15 PP_3037 C4-type zinc finger protein, DksA/TraR family no 0.16
    16 PP_5259 Transcriptional regulator, LysR family no 0.16
    17 PP_1841 Cytochrome c family protein 0.56 0.16
    18 PP_3922 putative inner membrane peptidase 0.74 0.16
    19 PP_2043 conserved exported protein of unknown function no 0.15
    20 PP_1437 Heavy metal sensor histidine kinase no 0.15

    Or look for negative cofitness