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  • Top cofit genes for PP_0988 from Pseudomonas putida KT2440

    glycine dehydrogenase
    SEED: Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
    KEGG: glycine dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0997 Sigma-54 dependent transcriptional regulator/sensory box protein 0.84 0.89
    2 PP_0986 aminomethyltransferase 0.97 0.76
    3 PP_0989 glycine cleavage system H protein 1 0.96 0.68
    4 PP_0987 L-serine dehydratase 0.80 0.53
    5 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.70 0.41
    6 PP_2704 Peptidase, M20/M25/M40 family no 0.39
    7 PP_2703 major facilitator transporter no 0.37
    8 PP_1127 Carboxylesterase 0.30 0.37
    9 PP_4948 Acyl-CoA dehydrogenase family protein 0.47 0.32
    10 PP_2436 Transcriptional regulator, LysR family no 0.29
    11 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease no 0.29
    12 PP_2701 Transcriptional regulator, LysR family no 0.28
    13 PP_5015 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) 0.67 0.28
    14 PP_1941 conserved protein of unknown function no 0.28
    15 PP_3925 conserved protein of unknown function 0.32 0.28
    16 PP_0966 Histidinol dehydrogenase 0.85 0.28
    17 PP_0417 Anthranilate synthase component 1 0.84 0.27
    18 PP_1378 alpha-ketoglutarate permease no 0.27
    19 PP_5014 Phosphoribosyl-AMP cyclohydrolase 0.70 0.27
    20 PP_4724 Carbamoyl-phosphate synthase small chain 0.74 0.27

    Or look for negative cofitness