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Cofit
Protein
Homologs
Top cofit genes for PP_0987 from
Pseudomonas putida KT2440
L-serine dehydratase
KEGG: L-serine dehydratase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_0986
aminomethyltransferase
0.81
0.54
2
PP
_0988
glycine dehydrogenase
0.80
0.53
3
PP
_0997
Sigma-54 dependent transcriptional regulator/sensory box protein
0.59
0.45
4
PP
_0989
glycine cleavage system H protein 1
0.49
0.39
5
PP
_3957
choline/carnitine/betaine transporter BetTC
0.31
0.29
6
PP
_0984
conserved membrane protein of unknown function
0.28
0.29
7
PP
_0963
putative BolA family protein
0.53
0.25
8
PP
_0368
putative Acyl-CoA dehydrogenase
0.42
0.24
9
PP
_1127
Carboxylesterase
0.40
0.23
10
PP
_0594
Transcriptional regulator, TetR family
0.31
0.22
11
PP
_3484
Response regulator receiver protein
no
0.22
12
PP
_5014
Phosphoribosyl-AMP cyclohydrolase
0.43
0.22
13
PP
_4776
AsnC family transcriptional regulator
no
0.22
14
PP
_2472
putative transcriptional regulator, MerR family
0.52
0.22
15
PP
_0966
Histidinol dehydrogenase
0.57
0.22
16
PP
_5203
5-formyltetrahydrofolate cyclo-ligase
0.25
0.21
17
PP
_2136
enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase
no
0.21
18
PP
_2703
major facilitator transporter
no
0.21
19
PP
_4840
D-alanine, beta-alanine, D-serine, glycine permease
0.75
0.21
20
PP
_0990
DoxX family protein
no
0.21
Or look for
negative cofitness