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  • Top cofit genes for PP_0960 from Pseudomonas putida KT2440

    phospholipid ABC transporter binding protein
    SEED: Uncharacterized ABC transporter, periplasmic component YrbD
    KEGG: putative ABC transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0961 toluene tolerance protein 0.99 0.89
    2 PP_2163 VacJ lipoprotein 0.99 0.87
    3 PP_0958 phospholipid ABC transporter ATP-binding subunit 0.99 0.87
    4 PP_0962 toluene-tolerance protein 0.96 0.75
    5 PP_0959 phospholipid ABC transporter 0.99 0.69
    6 PP_0725 conserved hypothetical TPR repeat protein 0.81 0.53
    7 PP_5058 Carboxy-terminal-processing protease 0.80 0.51
    8 PP_4570 conserved protein of unknown function 0.48 0.51
    9 PP_1384 Probable efflux pump outer membrane protein TtgC 0.45 0.50
    10 PP_1663 conserved exported protein of unknown function 0.91 0.49
    11 PP_0346 putative Heptose kinase WapQ 0.59 0.49
    12 PP_1232 conserved exported protein of unknown function 0.82 0.48
    13 PP_1385 Probable efflux pump membrane transporter TtgB 0.60 0.47
    14 PP_1386 Probable efflux pump periplasmic linker TtgA 0.92 0.46
    15 PP_3474 putative Curli fiber protein CsgE no 0.43
    16 PP_2148 transcription-repair coupling factor 0.93 0.42
    17 PP_2299 Trigger factor 0.83 0.42
    18 PP_0599 paraquat-inducible protein B 0.54 0.41
    19 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase 0.89 0.39
    20 PP_0598 paraquat-inducible protein A 0.59 0.39

    Or look for negative cofitness