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  • Top cofit genes for PP_0959 from Pseudomonas putida KT2440

    phospholipid ABC transporter
    SEED: Uncharacterized ABC transporter, permease component YrbE
    KEGG: putative ABC transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0961 toluene tolerance protein 0.98 0.72
    2 PP_0958 phospholipid ABC transporter ATP-binding subunit 1.00 0.69
    3 PP_0960 phospholipid ABC transporter binding protein 0.99 0.69
    4 PP_2163 VacJ lipoprotein 0.97 0.69
    5 PP_0962 toluene-tolerance protein 0.98 0.61
    6 PP_1663 conserved exported protein of unknown function 0.89 0.43
    7 PP_1384 Probable efflux pump outer membrane protein TtgC 0.47 0.42
    8 PP_0725 conserved hypothetical TPR repeat protein 0.78 0.42
    9 PP_1386 Probable efflux pump periplasmic linker TtgA 0.96 0.39
    10 PP_1385 Probable efflux pump membrane transporter TtgB 0.57 0.39
    11 PP_5058 Carboxy-terminal-processing protease 0.79 0.38
    12 PP_4570 conserved protein of unknown function 0.77 0.37
    13 PP_0346 putative Heptose kinase WapQ 0.59 0.37
    14 PP_4171 conserved exported protein of unknown function 0.25 0.35
    15 PP_4173 Sensor histidine kinase/response regulator 0.44 0.33
    16 PP_2148 transcription-repair coupling factor 0.94 0.33
    17 PP_1232 conserved exported protein of unknown function 0.82 0.33
    18 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.88 0.32
    19 PP_1650 Sensor protein GacS 0.88 0.32
    20 PP_3474 putative Curli fiber protein CsgE no 0.32

    Or look for negative cofitness