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  • Top cofit genes for PP_0958 from Pseudomonas putida KT2440

    phospholipid ABC transporter ATP-binding subunit
    SEED: Uncharacterized ABC transporter, ATP-binding protein YrbF
    KEGG: putative ABC transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0961 toluene tolerance protein 0.98 0.88
    2 PP_0960 phospholipid ABC transporter binding protein 0.99 0.87
    3 PP_2163 VacJ lipoprotein 0.99 0.85
    4 PP_0962 toluene-tolerance protein 0.98 0.75
    5 PP_0959 phospholipid ABC transporter 1.00 0.69
    6 PP_0725 conserved hypothetical TPR repeat protein 0.87 0.56
    7 PP_5058 Carboxy-terminal-processing protease 0.87 0.54
    8 PP_1663 conserved exported protein of unknown function 0.93 0.52
    9 PP_1384 Probable efflux pump outer membrane protein TtgC 0.64 0.49
    10 PP_4570 conserved protein of unknown function 0.76 0.46
    11 PP_1386 Probable efflux pump periplasmic linker TtgA 0.93 0.46
    12 PP_1385 Probable efflux pump membrane transporter TtgB 0.57 0.45
    13 PP_0346 putative Heptose kinase WapQ 0.56 0.45
    14 PP_1232 conserved exported protein of unknown function 0.88 0.44
    15 PP_3474 putative Curli fiber protein CsgE no 0.41
    16 PP_2148 transcription-repair coupling factor 0.91 0.41
    17 PP_0599 paraquat-inducible protein B 0.42 0.40
    18 PP_1650 Sensor protein GacS 0.88 0.40
    19 PP_4099 two-componenent system BarA/UvrY - regulatory subunit 0.88 0.40
    20 PP_1204 putative Lipoprotein 0.88 0.39

    Or look for negative cofitness