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  • Top cofit genes for PP_0957 from Pseudomonas putida KT2440

    D-arabinose 5-phosphate isomerase
    SEED: Arabinose 5-phosphate isomerase (EC 5.3.1.13)
    KEGG: arabinose-5-phosphate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5327 putative phosphate ABC transporter, permease subunit 0.71 0.22
    2 PP_4329 FlhB domain protein no 0.22
    3 PP_3065 Pyocin R2_PP, tail formation no 0.17
    4 PP_2348 Sensor histidine kinase no 0.16
    5 PP_5639 conserved exported protein of unknown function no 0.16
    6 PP_4653 adenine:H+ symporter 0.27 0.16
    7 PP_2088 RNA polymerase sigma factor SigX no 0.16
    8 PP_3376 putative phosphonate dehydrogenase no 0.16
    9 PP_3037 C4-type zinc finger protein, DksA/TraR family no 0.16
    10 PP_0202 CBS domain-containing protein no 0.16
    11 PP_5714 conserved protein of unknown function no 0.15
    12 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase 0.33 0.15
    13 PP_0841 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR 0.44 0.15
    14 PP_3957 choline/carnitine/betaine transporter BetTC no 0.15
    15 PP_0350 Outer membrane ferrichrome-iron receptor 0.41 0.15
    16 PP_1060 putative Glutamate synthase, large subunit no 0.15
    17 PP_2840 putative Membrane protein no 0.15
    18 PP_2839 conserved protein of unknown function no 0.15
    19 PP_2491 ThiJ/PfpI family protein no 0.15
    20 PP_0980 Probable cytosol aminopeptidase 0.43 0.15

    Or look for negative cofitness