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  • Top cofit genes for PP_0949 from Pseudomonas putida KT2440

    putative ATP-binding protein UPF0042
    SEED: Hypothetical ATP-binding protein UPF0042, contains P-loop
    KEGG: UPF0042 nucleotide-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) 0.84 0.45
    2 PP_0397 protein kinase 0.55 0.45
    3 PP_0396 conserved protein of unknown function 0.93 0.45
    4 PP_0395 putative type IV piliation protein 0.93 0.44
    5 PP_4008 ATP-dependent serine protease 0.82 0.42
    6 PP_5146 RNA pyrophosphohydrolase 0.72 0.41
    7 PP_0406 Nucleotidyltransferase family protein 0.90 0.38
    8 PP_5045 tRNA sulfurtransferase 0.74 0.38
    9 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.54 0.38
    10 PP_3649 Transcriptional regulator, GntR family 0.65 0.37
    11 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 0.86 0.37
    12 PP_1318 Cytochrome b 0.94 0.37
    13 PP_4143 conserved protein of unknown function 0.75 0.36
    14 PP_1598 regulatory intramembrane protein RIP zinc protease 0.86 0.35
    15 PP_4726 Chaperone protein DnaJ 0.78 0.35
    16 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.88 0.35
    17 PP_0951 Ribosome hibernation promoting factor 0.90 0.34
    18 PP_1764 Phosphoglycolate phosphatase 2 0.88 0.34
    19 PP_2820 HTH-type transcriptional regulator nfxB no 0.33
    20 PP_1309 conserved exported protein of unknown function 0.88 0.33

    Or look for negative cofitness