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  • Top cofit genes for PP_0941 from Pseudomonas putida KT2440

    putative ribosome associated protein
    SEED: FIG138315: Putative alpha helix protein
    KEGG: ribosome-associated protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1627 conserved protein of unknown function no 0.55
    2 PP_1798 Outer membrane efflux protein no 0.53
    3 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.86 0.53
    4 PP_5283 periplasmic dipeptide transport protein 0.52 0.52
    5 PP_3627 conserved protein of unknown function no 0.49
    6 PP_0540 conserved inner membrane protein 0.52 0.49
    7 PP_2148 transcription-repair coupling factor 0.69 0.49
    8 PP_1774 conserved exported protein of unknown function no 0.47
    9 PP_5279 conserved protein of unknown function 0.45 0.46
    10 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.46
    11 PP_1797 HlyD family secretion protein no 0.46
    12 PP_1777 phosphomannomutase 0.33 0.45
    13 PP_4872 putative enzyme of unknown function 0.27 0.45
    14 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.91 0.45
    15 PP_1803 UDP-sugar epimerase 0.36 0.42
    16 PP_1523 conserved protein of unknown function 0.23 0.42
    17 PP_1871 Protease HtpX no 0.42
    18 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase 0.45 0.42
    19 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.81 0.41
    20 PP_1663 conserved exported protein of unknown function no 0.41

    Or look for negative cofitness