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  • Top cofit genes for PP_0883 from Pseudomonas putida KT2440

    glycine-glutamate dipeptide porin
    SEED: Outer membrane porin, OprD family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0884 dipeptide ABC transporter - periplasmic binding protein 0.91 0.28
    2 PP_0885 dipeptide ABC transporter - periplasmic binding protein 0.89 0.24
    3 PP_0099 conserved protein of unknown function 0.64 0.24
    4 PP_4918 conserved protein of unknown function 0.26 0.21
    5 PP_0882 dipeptide ABC transporter - periplasmic binding protein 0.93 0.21
    6 PP_3581 conserved membrane protein of unknown function no 0.20
    7 PP_1440 tRNA (mo5U34)-methyltransferase no 0.19
    8 PP_5265 Xanthine phosphoribosyltransferase no 0.18
    9 PP_4542 putative ABC transporter, ATP-binding protein/permease protein no 0.17
    10 PP_4766 ATP-dependent RNA helicase 0.19 0.17
    11 PP_1019 carbohydrate-selective porin no 0.17
    12 PP_1454 conserved protein of unknown function no 0.17
    13 PP_1598 regulatory intramembrane protein RIP zinc protease 0.74 0.16
    14 PP_1909 putative septum formation protein no 0.16
    15 PP_2641 Iron-sulfur cluster-binding protein no 0.16
    16 PP_1860 Organic hydroperoxide resistance transcriptional regulator 0.26 0.16
    17 PP_2419 conserved membrane protein of unknown function DUF1624 family no 0.16
    18 PP_4547 putative Glutamine synthetase no 0.16
    19 PP_2549 conserved protein of unknown function no 0.16
    20 PP_1896 putative ABC transporter - permease subunit 0.67 0.16

    Or look for negative cofitness