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  • Top cofit genes for PP_0873 from Pseudomonas putida KT2440

    putrescine-binding periplasmic protein
    SEED: Putrescine ABC transporter, periplasmic putrescine-binding protein
    KEGG: putrescine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0906 putative Multidrug efflux RND transporter no 0.18
    2 PP_1072 Leucine-rich repeat domain protein no 0.18
    3 PP_4781 Sensor histidine kinase no 0.17
    4 PP_5143 conserved membrane protein of unknown function no 0.16
    5 PP_4974 NhaP-type Na+/H+ and K+/H+ antiporters no 0.16
    6 PP_4217 outer membrane ferripyoverdine receptor FpvA, TonB-dependent no 0.16
    7 PP_0524 putative Periplasmic cobalamin-binding protein HutB no 0.16
    8 PP_4524 putative Sodium-solute symporter no 0.15
    9 PP_2274 conserved protein of unknown function no 0.15
    10 PP_0889 conserved exported protein of unknown function no 0.15
    11 PP_1301 quality control serine endoprotease DegS 0.33 0.15
    12 PP_2072 Transcriptional regulator, AraC family no 0.15
    13 PP_4232 Cytochrome c family protein no 0.15
    14 PP_1452 MutT/nudix family protein no 0.15
    15 PP_3941 maleamate amidohydrolase no 0.15
    16 PP_0049 conserved protein of unknown function no 0.14
    17 PP_1419 tricarboxylate-specific outer membrane porin 0.24 0.14
    18 PP_5072 efflux transporter no 0.14
    19 PP_1781 putative O-acyltransferase no 0.14
    20 PP_5391 conserved hypothetical protein no 0.14

    Or look for negative cofitness