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  • Top cofit genes for PP_0871 from Pseudomonas putida KT2440

    putative Glycine betaine/carnitine/choline ABC transporter, permease protein
    SEED: L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1)
    KEGG: osmoprotectant transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0806 putative Surface adhesion protein no 0.19
    2 PP_0804 Protein secretion ABC efflux system, permease and ATP-binding protein 0.26 0.18
    3 PP_0805 Outer membrane efflux protein no 0.18
    4 PP_0803 Protein secretion ABC efflux system, membrane fusion protein no 0.16
    5 PP_3072 Ecotin no 0.16
    6 PP_1475 CAIB/BAIF family protein no 0.15
    7 PP_4644 DNA repair enzyme 0.39 0.15
    8 PP_3415 Transcriptional regulator, LacI family no 0.15
    9 PP_3471 conserved protein of unknown function no 0.15
    10 PP_0489 formate dehydrogenase-O major subunit no 0.15
    11 PP_2069 putative Multidrug efflux MFS outer membrane protein no 0.14
    12 PP_1060 putative Glutamate synthase, large subunit no 0.14
    13 PP_0491 formate dehydrogenase-O, gamma subunit 0.41 0.14
    14 PP_5631 protein of unknown function no 0.14
    15 PP_2290 conserved protein of unknown function no 0.13
    16 PP_2725 Protease PfpI no 0.13
    17 PP_2361 putative chaperone protein no 0.13
    18 PP_2766 Long-chain-fatty-acid--CoA ligase-related protein no 0.13
    19 PP_2784 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.13
    20 PP_3722 Alanine racemase no 0.13

    Or look for negative cofitness