Top cofit genes for PP_0865 from Pseudomonas putida KT2440

ECF subfamily RNA polymerase sigma-24 factor
SEED: FIG006045: Sigma factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3581		conserved membrane protein of unknown function	0.29	0.16
2	PP_0210		putative Phycobiliprotein	0.46	0.14
3	PP_3287		transcriptional regulator with 4Fe-4S cluster; Crp/Fnr family	0.47	0.14
4	PP_0361		putative Competence protein ComF	no	0.14
5	PP_2530		conserved protein of unknown function	no	0.14
6	PP_0706		fused O(6)-alkylguanine DNA alkyltransferase - transcriptional activator	0.14	0.14
7	PP_2072		Transcriptional regulator, AraC family	no	0.14
8	PP_0677		putative Lipoprotein	no	0.14
9	PP_4751		Amino acid ABC transporter, ATP-binding protein	no	0.14
10	PP_4773		conserved protein of unknown function	no	0.14
11	PP_0278		conserved protein of unknown function	no	0.14
12	PP_1879		conserved protein of unknown function	no	0.14
13	PP_5722		conserved protein of unknown function of phage origin	no	0.14
14	PP_5272		conserved protein of unknown function	0.26	0.13
15	PP_2360		putative type 1 pili subunit CsuA/B protein	no	0.13
16	PP_0708		putative Betaine-aldehyde dehydrogenase	no	0.13
17	PP_2949		putative permease	no	0.13
18	PP_0359		serine/threonine protein kinase	no	0.13
19	PP_2608		Shikimate dehydrogenase family protein	no	0.13
20	PP_4056		putative phosphohydrolase of unknown function	no	0.13

Or look for negative cofitness