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  • Top cofit genes for PP_0859 from Pseudomonas putida KT2440

    putative ketoglutaramate omega-amidase
    SEED: Aliphatic amidase AmiE (EC 3.5.1.4)
    KEGG: carbon-nitrogen hydrolase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4050 glycogen synthase 0.36 0.25
    2 PP_0353 Exonuclease 0.23 0.24
    3 PP_1234 putative permease 0.35 0.23
    4 PP_0176 putative efflux transporter 0.57 0.23
    5 PP_4246 Periplasmic binding protein no 0.22
    6 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.71 0.21
    7 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.87 0.20
    8 PP_4100 Transcriptional regulator, Cro/CI family no 0.20
    9 PP_0858 putative methionine/glutamine aminotransferase 0.77 0.20
    10 PP_3417 D-gluconate transporter no 0.20
    11 PP_1014 aldose-ketose isomerase 0.27 0.19
    12 PP_1016 mannose/glucose ABC transporter, permease protein no 0.19
    13 PP_5233 ammonium transporter AmtB no 0.19
    14 PP_2070 Transcriptional regulator, AraC family no 0.19
    15 PP_1011 glucokinase 0.53 0.19
    16 PP_2547 Transcriptional regulator, LysR family no 0.19
    17 PP_3659 transcriptional regulator, AraC family no 0.19
    18 PP_1650 Sensor protein GacS 0.25 0.19
    19 PP_4911 conserved protein of unknown function 0.47 0.19
    20 PP_3676 conserved protein of unknown function no 0.19

    Or look for negative cofitness