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  • Top cofit genes for PP_0851 from Pseudomonas putida KT2440

    Type IV pili biogenesis protein PilF
    SEED: Type IV pilus biogenesis protein PilF
    KEGG: type IV pilus assembly protein PilF

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2434 conserved protein of unknown function no 0.21
    2 PP_3246 Beta-carotene hydroxylase no 0.19
    3 PP_4762 Acyl-CoA thioesterase II no 0.17
    4 PP_4483 histidine lysine / arginine / ornithine ABC transporter - ATP binding subunit no 0.17
    5 PP_4486 lysine / arginine / ornithine ABC transporter - periplasmic binding protein no 0.17
    6 PP_2157 Sensor histidine kinase no 0.17
    7 PP_2379 putative cytochrome oxidase biogenesis protein no 0.17
    8 PP_5620 conserved protein of unknown function no 0.16
    9 PP_4412 conserved protein of unknown function no 0.16
    10 PP_1242 conserved protein of unknown function no 0.16
    11 PP_1909 putative septum formation protein no 0.16
    12 PP_5337 LysR family transcriptional regulator 0.85 0.16
    13 PP_3296 putative transporter no 0.16
    14 PP_1790 putative Acylneuraminate cytidylyltransferase no 0.16
    15 PP_2795 AMP-binding domain protein no 0.16
    16 PP_3304 Multidrug resistance transporter, Bcr/CflA family 0.22 0.16
    17 PP_5279 conserved protein of unknown function 0.32 0.16
    18 PP_0146 putative transport protein no 0.16
    19 PP_4484 histidine / lysine / arginine / ornithine ABC transporter - permease subunit 0.70 0.15
    20 PP_3748 conserved hypothetical protein no 0.15

    Or look for negative cofitness