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  • Top cofit genes for PP_0846 from Pseudomonas putida KT2440

    DnaK-like molecular chaperone specific for IscU
    SEED: Chaperone protein HscA
    KEGG: molecular chaperone HscA

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4880 exoribonuclease R 0.55 0.35
    2 PP_0123 DNA polymerase I, 5 no 0.33
    3 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase no 0.32
    4 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I no 0.31
    5 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase no 0.31
    6 PP_0547 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase no 0.31
    7 PP_4546 ATP-dependent helicase HrpA no 0.31
    8 PP_2378 Fe/S biogenesis protein NfuA 0.90 0.31
    9 PP_1994 tRNA pseudouridine (38-40)synthase 0.54 0.31
    10 PP_2144 Transcriptional regulator, TetR family no 0.30
    11 PP_4722 Transcription elongation factor GreA 0.73 0.29
    12 PP_4902 Oligoribonuclease no 0.28
    13 PP_4560 putative Ribonuclease BN no 0.28
    14 PP_4803 D-alanyl-D-alanine carboxypeptidase no 0.28
    15 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 no 0.27
    16 PP_2302 DNA-binding, ATP-dependent protease 0.61 0.27
    17 PP_2852 putative Sulfatase domain protein no 0.27
    18 PP_4900 epoxyqueuosine reductase no 0.27
    19 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase no 0.27
    20 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.76 0.27

    Or look for negative cofitness