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  • Top cofit genes for PP_0832 from Pseudomonas putida KT2440

    S-adenosylmethionine:tRNA ribosyltransferase-isomerase
    SEED: S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
    KEGG: S-adenosylmethionine:tRNA ribosyltransferase-isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4880 exoribonuclease R 0.97 0.49
    2 PP_0123 DNA polymerase I, 5 0.53 0.48
    3 PP_4900 epoxyqueuosine reductase 0.86 0.47
    4 PP_4546 ATP-dependent helicase HrpA 0.33 0.45
    5 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.80 0.44
    6 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.73 0.43
    7 PP_4722 Transcription elongation factor GreA 0.78 0.43
    8 PP_1321 ClpXP protease specificity-enhancing factor 0.48 0.42
    9 PP_0833 queuine tRNA-ribosyltransferase 0.94 0.42
    10 PP_4803 D-alanyl-D-alanine carboxypeptidase 0.73 0.41
    11 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.85 0.39
    12 PP_3649 Transcriptional regulator, GntR family no 0.39
    13 PP_5294 Ribonuclease PH 0.72 0.39
    14 PP_1994 tRNA pseudouridine (38-40)synthase 0.79 0.38
    15 PP_1226 pre-queuosine 0 synthase 0.80 0.38
    16 PP_4475 succinylglutamate desuccinylase 0.51 0.38
    17 PP_0214 4-aminobutyrate aminotransferase 0.80 0.36
    18 PP_2223 conserved protein of unknown function 0.73 0.36
    19 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.36
    20 PP_0063 putative Lipid A biosynthesis lauroyl acyltransferase 0.71 0.35

    Or look for negative cofitness