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  • Top cofit genes for PP_0829 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: FIG045511: hypothetical antitoxin (to FIG022160: hypothetical toxin)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.23
    2 PP_5435 conserved protein of unknown function no 0.19
    3 PP_5588 conserved protein of unknown function no 0.19
    4 PP_3788 putative Non-ribosomal peptide synthetase no 0.19
    5 PP_0506 putative ABC efflux transporter, permease protein 0.30 0.18
    6 PP_2501 putative phage integrase no 0.18
    7 PP_0946 superoxide dismutase (Mn) no 0.17
    8 PP_4927 Cyclolysin secretion/processing ATP-binding protein CyaB no 0.16
    9 PP_1948 Benzaldehyde dehydrogenase no 0.16
    10 PP_0731 phosphatidylcholine synthase no 0.16
    11 PP_3787 conserved protein of unknown function no 0.16
    12 PP_0375 Prolyl oligopeptidase family protein no 0.16
    13 PP_3183 SCO1/SenC family protein/cytochrome c no 0.16
    14 PP_3065 Pyocin R2_PP, tail formation no 0.16
    15 PP_5516 protein of unknown function no 0.16
    16 PP_4463 Carbon-nitrogen hydrolase family protein no 0.16
    17 PP_3299 Outer membrane lipoprotein no 0.16
    18 PP_3790 diaminopimelate epimerase no 0.16
    19 PP_4346 D-alanine--D-alanine ligase A no 0.15
    20 PP_3931 putative transporter no 0.15

    Or look for negative cofitness