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  • Top cofit genes for PP_0822 from Pseudomonas putida KT2440

    tRNA 2-selenouridine synthase
    SEED: Selenophosphate-dependent tRNA 2-selenouridine synthase
    KEGG: tRNA 2-selenouridine synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3090 OmpA domain protein no 0.18
    2 PP_0076 putative choline betaine-binding protein 0.28 0.17
    3 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L no 0.17
    4 PP_t29 tRNA-Ala no 0.17
    5 PP_5028 proline iminopeptidase no 0.16
    6 PP_4121 NADH-quinone oxidoreductase subunit C/D no 0.16
    7 PP_1816 Alcohol dehydrogenase, zinc-containing no 0.15
    8 PP_5534 protein of unknown function no 0.15
    9 PP_0065 NAD-binding component of TrK potassium transporter 0.27 0.15
    10 PP_4776 AsnC family transcriptional regulator 0.27 0.15
    11 PP_2880 Transcriptional regulator, TetR family 0.30 0.15
    12 PP_2944 Sensor histidine kinase no 0.15
    13 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.20 0.15
    14 PP_3583 multidrug efflux transport system - membrane subunit 0.22 0.15
    15 PP_2939 toxin of the YefM-YoeB antitoxin/toxin complex and DNA-binding transcriptional repressor 0.40 0.14
    16 PP_3521 conserved membrane protein of unknown function 0.29 0.14
    17 PP_3450 conserved protein of unknown function containing TPR repeat no 0.14
    18 PP_4697 poly(A) polymerase no 0.14
    19 PP_1906 ribosomal large subunit pseudouridine synthase C 0.30 0.14
    20 PP_0385 putative serine acetyltransferase no 0.14

    Or look for negative cofitness