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Cofit
Protein
Homologs
Top cofit genes for PP_0798 from
Pseudomonas putida KT2440
GGDEF domain protein
SEED: GGDEF domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_1879
conserved protein of unknown function
no
0.18
2
PP
_3835
Sensory box histidine kinase
no
0.18
3
PP
_2738
putative Transcriptional regulator
0.19
0.17
4
PP
_3340
putative TonB-dependent receptor
no
0.17
5
PP
_3346
Nickel transporter ATP-binding protein
no
0.17
6
PP
_2752
conserved exported protein of unknown function
no
0.17
7
PP
_3178
glycerate kinase
0.29
0.16
8
PP
_1882
conserved membrane protein of unknown function
no
0.16
9
PP
_t29
tRNA-Ala
no
0.16
10
PP
_2025
Exonuclease SbcD
0.37
0.16
11
PP
_2400
conserved protein of unknown function
no
0.16
12
PP
_5712
conserved protein of unknown function
no
0.15
13
PP
_2401
conserved membrane protein of unknown function
no
0.15
14
PP
_2404
conserved exported protein of unknown function
no
0.15
15
PP
_3763
putative CobF protein
no
0.15
16
PP
_3446
threonine deaminase
no
0.15
17
PP
_2757
putative Sugar-binding protein
no
0.15
18
PP
_2186
putative Formate dehydrogenase, delta subunit
no
0.14
19
PP
_2782
Pyridoxalphosphate dependent aminotransferase, class III
no
0.14
20
PP
_5004
Poly(3-hydroxyalkanoate) depolymerase
no
0.14
Or look for
negative cofitness