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  • Top cofit genes for PP_0792 from Pseudomonas putida KT2440

    catabolite repressor-activator, DNA-binding transcriptional dual regulator
    SEED: Fructose repressor FruR, LacI family
    KEGG: LacI family transcriptional regulator, fructose operon transcriptional repressor

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0879 dipeptide ABC transporter - putative ATP binding subunit 0.42 0.25
    2 PP_0248 Probable alpha-L-glutamate ligase no 0.25
    3 PP_0878 dipeptide ABC transporter, binding subunit 0.65 0.23
    4 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.22
    5 PP_4922 Phosphomethylpyrimidine synthase 0.47 0.22
    6 PP_1348 putative MutT/nudix family protein/thiamine-phosphate pyrophosphorylase no 0.21
    7 PP_1253 Transcriptional regulator, ArsR family no 0.21
    8 PP_2652 putative Hydratase/decarboxylase no 0.21
    9 PP_0356 malate synthase G 0.49 0.20
    10 PP_0881 dipeptide ABC transporter - putative membrane subunit 0.55 0.20
    11 PP_3790 diaminopimelate epimerase no 0.20
    12 PP_1233 sulfurtransferase 0.30 0.19
    13 PP_3786 aminotransferase no 0.19
    14 PP_1020 putative glucose-6-phosphate 1-epimerase 0.28 0.18
    15 PP_3527 Transcriptional regulator, TetR family 0.49 0.18
    16 PP_0937 endoribonuclease G (RNAse G) 0.96 0.17
    17 PP_0057 major facilitator family transporter no 0.17
    18 PP_3052 conserved protein of unknown function no 0.17
    19 PP_4911 conserved protein of unknown function no 0.17
    20 PP_2217 enoyl-CoA hydratase no 0.17

    Or look for negative cofitness