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  • Top cofit genes for PP_0767 from Pseudomonas putida KT2440

    Transcriptional regulator, LuxR family
    SEED: Transcriptional regulator, LuxR family
    KEGG: LuxR family transcriptional regulator, maltose regulon positive regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0763 Medium-chain-fatty-acid CoA ligase 0.55 0.75
    2 PP_2019 adhesin-associated MmpL efflux pump (from data) 0.75 0.63
    3 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) 0.80 0.59
    4 PP_0765 putative adhesin (DUF1302) (from data) 0.87 0.58
    5 PP_2436 Transcriptional regulator, LysR family 0.38 0.57
    6 PP_3925 conserved protein of unknown function no 0.57
    7 PP_2903 peptidyl-prolyl cis-trans isomerase B (rotamase B) 0.40 0.55
    8 PP_1941 conserved protein of unknown function no 0.53
    9 PP_2018 adhesin-associated BNR repeat protein (from data) 0.36 0.52
    10 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.48 0.48
    11 PP_0370 Acyl-CoA dehydrogenase family protein 0.53 0.47
    12 PP_4948 Acyl-CoA dehydrogenase family protein no 0.45
    13 PP_4817 MaoC domain protein 0.42 0.45
    14 PP_4565 Isocitrate dehydrogenase kinase/phosphatase 0.33 0.43
    15 PP_4116 isocitrate lyase 0.26 0.42
    16 PP_0248 Probable alpha-L-glutamate ligase no 0.40
    17 PP_0356 malate synthase G 0.23 0.40
    18 PP_1181 DNA-binding response regulator 0.61 0.39
    19 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.45 0.39
    20 PP_0368 putative Acyl-CoA dehydrogenase 0.34 0.39

    Or look for negative cofitness