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  • Top cofit genes for PP_0761 from Pseudomonas putida KT2440

    Ribosomal RNA small subunit methyltransferase C
    SEED: Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52)
    KEGG: ribosomal RNA small subunit methyltransferase C

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4722 Transcription elongation factor GreA 0.69 0.28
    2 PP_1320 stringent starvation protein A 0.54 0.27
    3 PP_2852 putative Sulfatase domain protein no 0.27
    4 PP_2929 Carboxynorspermidine/carboxyspermidine decarboxylase 0.24 0.26
    5 PP_4710 tRNA pseudouridine 55 synthase 0.82 0.24
    6 PP_4859 Transcriptional regulator, TetR family 0.74 0.24
    7 PP_1191 S4 domain protein no 0.23
    8 PP_5025 Glucans biosynthesis glucosyltransferase H 0.43 0.23
    9 PP_0674 ADP/ATP ratio sensor and inhibitor of translation 0.69 0.23
    10 PP_1226 pre-queuosine 0 synthase 0.64 0.22
    11 PP_0003 16S RNA methyltransferase 0.91 0.21
    12 PP_1786 putative Glycosyl transferase no 0.21
    13 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.81 0.21
    14 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.64 0.21
    15 PP_2928 Saccharopine dehydrogenase 0.24 0.20
    16 PP_0058 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase no 0.20
    17 PP_3144 L-serine dehydratase no 0.20
    18 PP_0504 Outer membrane protein OprG no 0.20
    19 PP_1099 Cold shock protein CapB no 0.20
    20 PP_3957 choline/carnitine/betaine transporter BetTC no 0.20

    Or look for negative cofitness