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  • Top cofit genes for PP_0737 from Pseudomonas putida KT2440

    lipid A 3-O-deacylase
    SEED: Lipid A 3-O-deacylase
    KEGG: lipid A 3-O-deacylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2210 LysR family transcriptional regulator no 0.24
    2 PP_3503 Sigma-54 dependent transcriptional regulator no 0.24
    3 PP_0994 putative RNA polymerase sigma factor no 0.23
    4 PP_2832 galactose-binding protein regulator no 0.21
    5 PP_2549 conserved protein of unknown function no 0.21
    6 PP_4389 Flagellar basal-body rod modification protein FlgD 0.49 0.20
    7 PP_4385 flagellar basal-body rod protein FlgG 0.53 0.20
    8 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) 0.66 0.20
    9 PP_4370 Flagellar hook-basal body complex protein FliE 0.47 0.20
    10 PP_5166 Sigma-54 dependent transcriptional regulator 0.25 0.19
    11 PP_3409 putative Cobalamin biosynthesis protein cobE no 0.19
    12 PP_4662 conserved protein of unknown function 0.24 0.19
    13 PP_4384 Flagellar L-ring protein no 0.19
    14 PP_t29 tRNA-Ala no 0.19
    15 PP_5144 conserved protein of unknown function 0.27 0.19
    16 PP_3342 nickel ABC transporter periplasmic binding protein no 0.19
    17 PP_5157 conserved exported protein of unknown function no 0.18
    18 PP_0663 Transcriptional regulator, AsnC family no 0.18
    19 PP_4386 flagellar basal-body rod protein FlgF 0.57 0.18
    20 PP_2121 putative Lipoprotein no 0.18

    Or look for negative cofitness