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  • Top cofit genes for PP_0715 from Pseudomonas putida KT2440

    Outer membrane efflux protein
    SEED: RND efflux system, outer membrane lipoprotein, NodT family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0267 putative Outer membrane ferric siderophore receptor no 0.18
    2 PP_3949 HTH-type transcriptional repressor NicS no 0.17
    3 PP_4339 Protein phosphatase CheZ no 0.17
    4 PP_3667 Creatinase no 0.17
    5 PP_5138 putative transcriptional regulator LysR family no 0.17
    6 PP_4011 isocitrate dehydrogenase, NADP(+)-specific 0.32 0.17
    7 PP_1861 Transcriptional regulator, LysR family no 0.17
    8 PP_1559 Holin no 0.16
    9 PP_2423 Fe(2+)/alpha-ketoglutarate-dependent dioxygenase no 0.16
    10 PP_5580 protein of unknown function no 0.16
    11 PP_4209 ABC export system, membrane fusion protein no 0.16
    12 PP_4781 Sensor histidine kinase no 0.16
    13 PP_3352 Arylsulfatase no 0.15
    14 PP_2330 conserved protein of unknown function no 0.15
    15 PP_1242 conserved protein of unknown function no 0.15
    16 PP_0225 sulfur compound ABC transporter - ATP-binding subunit no 0.15
    17 PP_0249 conserved protein of unknown function no 0.15
    18 PP_0660 S-methyl-L-methionine transporter no 0.15
    19 PP_2556 Chromate transporter no 0.15
    20 PP_2376 Esterified fatty acid cis/trans isomerase no 0.15

    Or look for negative cofitness