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  • Top cofit genes for PP_0700 from Pseudomonas putida KT2440

    putative Transmembrane sensor
    SEED: Iron siderophore sensor protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0482 bacterioferritin no 0.29
    2 PP_1083 (2Fe-2S)-binding protein no 0.24
    3 PP_4755 Outer membrane ferrichrome-iron receptor no 0.24
    4 PP_1082 bacterioferritin no 0.24
    5 PP_5092 putative exported NLP/P60 protein no 0.23
    6 PP_4882 Iron ABC transporter, permease protein no 0.23
    7 PP_4610 conserved protein of unknown function containing PepSY-associated TM helix domain no 0.23
    8 PP_1202 putative enzyme involved in modification of phospholipids no 0.20
    9 PP_3803 putative Cation ABC transporter, permease protein 0.29 0.19
    10 PP_0910 conserved exported protein of unknown function no 0.19
    11 PP_2348 Sensor histidine kinase no 0.19
    12 PP_0188 putative Uroporphyrin-III C-methyltransferase no 0.19
    13 PP_1034 multicopper oxidase no 0.18
    14 PP_1349 ATP:cob(I)alamin adenosyltransferase no 0.18
    15 PP_5053 Protein-export protein SecB no 0.18
    16 PP_3453 putative Sensor protein RstB no 0.18
    17 PP_3827 2-nitropropane dioxygenase no 0.18
    18 PP_3916 conserved protein of unknown function no 0.18
    19 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily no 0.17
    20 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily no 0.17

    Or look for negative cofitness