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  • Top cofit genes for PP_0672 from Pseudomonas putida KT2440

    Sensory box protein
    SEED: Serine hydroxymethyltransferase (EC 2.1.2.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0165 GGDEF domain protein 0.66 0.58
    2 PP_0168 putative surface adhesion protein no 0.58
    3 PP_0167 Toxin secretion ATP-binding protein 0.57 0.58
    4 PP_0166 HlyD family secretion protein 0.65 0.57
    5 PP_4519 Agglutination protein 0.64 0.57
    6 PP_5429 protein of unknown function no 0.44
    7 PP_4373 Transcriptional regulator FleQ 0.63 0.44
    8 PP_2413 GGDEF family protein no 0.40
    9 PP_3761 Sensor histidine kinase/response regulator 0.18 0.39
    10 PP_4959 diguanylate cyclase 0.40 0.39
    11 PP_4363 Sensor histidine kinase/response regulator 0.55 0.35
    12 PP_1494 Response regulator/GGDEF domain protein 0.40 0.29
    13 PP_4246 Periplasmic binding protein 0.37 0.29
    14 PP_1488 Methyl-accepting chemotaxis transducer 0.24 0.29
    15 PP_1492 Sensor histidine kinase/response regulator no 0.27
    16 PP_1490 Probable biofilm formation methyltransferase WspC 0.62 0.27
    17 PP_0563 Response regulator 0.48 0.25
    18 PP_0174 conserved protein of unknown function no 0.25
    19 PP_0355 Response regulator no 0.25
    20 PP_0743 conserved protein with NAD(P)-binding Rossmann-fold domain 0.49 0.24

    Or look for negative cofitness