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  • Top cofit genes for PP_0663 from Pseudomonas putida KT2440

    Transcriptional regulator, AsnC family
    SEED: Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0882 dipeptide ABC transporter - periplasmic binding protein no 0.25
    2 PP_2210 LysR family transcriptional regulator no 0.24
    3 PP_0369 putative diguanylate cyclase no 0.23
    4 PP_0864 ornithine decarboxylase 0.24 0.23
    5 PP_2043 conserved exported protein of unknown function no 0.23
    6 PP_3208 Oxidoreductase, Pdr/VanB family no 0.23
    7 PP_2025 Exonuclease SbcD no 0.22
    8 PP_5598 conserved protein of unknown function no 0.22
    9 PP_4313 putative peptidylprolyl isomerase no 0.22
    10 PP_4676 methionine sulfoxide reductase catalytic subunit 0.42 0.21
    11 PP_2638 putative Cellulose synthase operon C protein no 0.21
    12 PP_t11 tRNA-Lys no 0.21
    13 PP_1824 Smr domain protein no 0.21
    14 PP_2782 Pyridoxalphosphate dependent aminotransferase, class III no 0.21
    15 PP_2200 conserved protein of unknown function no 0.21
    16 PP_4520 conserved protein of unknown function no 0.21
    17 PP_4868 Nicotinate phosphoribosyltransferase no 0.20
    18 PP_0830 Acetyltransferase, GNAT family no 0.20
    19 PP_1707 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.20
    20 PP_2694 Aldehyde dehydrogenase family protein no 0.20

    Or look for negative cofitness