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  • Top cofit genes for PP_0661 from Pseudomonas putida KT2440

    putative Transcriptional regulator AmpR
    SEED: Transcriptional regulator, LysR family
    KEGG: LysR family transcriptional regulator, glycine cleavage system transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1756 conserved exported protein of unknown function no 0.19
    2 PP_2829 Transcriptional regulator, GntR family no 0.19
    3 PP_2601 Transcriptional regulator, IclR family 0.25 0.18
    4 PP_3638 putative Acyl-CoA dehydrogenase no 0.17
    5 PP_4316 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.16
    6 PP_1651 two-component response regulator no 0.16
    7 PP_1421 putative Sensor histidine kinase TctE no 0.16
    8 PP_3636 putative Sulfonate ABC transporter, periplasmic sulfonate-binding protein no 0.15
    9 PP_3660 Transcriptional regulator, LysR family no 0.15
    10 PP_3950 Methyl-accepting chemotaxis transducer no 0.15
    11 PP_0979 DNA polymerase III subunit chi no 0.15
    12 PP_0350 Outer membrane ferrichrome-iron receptor 0.29 0.14
    13 PP_2043 conserved exported protein of unknown function no 0.14
    14 PP_1419 tricarboxylate-specific outer membrane porin no 0.14
    15 PP_2587 LuxR family transcriptional regulator no 0.14
    16 PP_0358 conserved membrane protein of unknown function 0.61 0.14
    17 PP_4621 Homogentisate 1,2-dioxygenase no 0.14
    18 PP_1748 conserved protein of unknown function 0.30 0.14
    19 PP_2338 2-methylcitrate dehydratase no 0.14
    20 PP_t12 tRNA-Thr no 0.14

    Or look for negative cofitness