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  • Top cofit genes for PP_0625 from Pseudomonas putida KT2440

    Chaperone protein ClpB
    SEED: ClpB protein
    KEGG: ATP-dependent Clp protease ATP-binding subunit ClpB

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2645 magnesium transporter, ATP-dependent 0.49 0.29
    2 PP_4337 chemotaxis response regulator protein-glutamate methylesterase of group 1 operon 0.85 0.27
    3 PP_2646 conserved protein of unknown function no 0.26
    4 PP_4179 Chaperone protein HtpG 0.77 0.24
    5 PP_4334 ParA family protein 0.79 0.24
    6 PP_4158 sensor protein 0.38 0.23
    7 PP_3484 Response regulator receiver protein no 0.23
    8 PP_1318 Cytochrome b 0.91 0.23
    9 PP_4333 CheW domain protein 0.86 0.23
    10 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.88 0.22
    11 PP_4392 chemotaxis protein methyltransferase 0.78 0.22
    12 PP_4591 Ribonuclease D 0.58 0.22
    13 PP_0951 Ribosome hibernation promoting factor 0.56 0.21
    14 PP_3948 nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) 0.37 0.21
    15 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.73 0.21
    16 PP_4726 Chaperone protein DnaJ 0.64 0.21
    17 PP_0396 conserved protein of unknown function 0.71 0.21
    18 PP_0397 protein kinase 0.69 0.20
    19 PP_4320 cytochrome c-type biogenesis protein 0.76 0.20
    20 PP_0395 putative type IV piliation protein 0.66 0.20

    Or look for negative cofitness