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  • Top cofit genes for PP_0616 from Pseudomonas putida KT2440

    Branched-chain amino acid ABC transporter, ATP binding protein
    SEED: Urea ABC transporter, ATPase protein UrtD
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4585 RNA methyltransferase, TrmH family no 0.14
    2 PP_1117 conserved protein of unknown function no 0.13
    3 PP_3849 putative calcium-binding protein, hemolysin-type no 0.13
    4 PP_5037 lipocalin family lipoprotein no 0.13
    5 PP_3897 conserved protein of unknown function no 0.13
    6 PP_1678 bifunctional cobinamide-P guanylyltransferase - adenosylcobinamide kinase 0.25 0.13
    7 PP_2208 phosphonoacetaldehyde hydrolase no 0.13
    8 PP_3090 OmpA domain protein no 0.13
    9 PP_0026 putative cobalt/cadmium/zinc exporter no 0.13
    10 PP_4924 Serine protease, subtilase family no 0.12
    11 PP_3477 Putative secretion type II protein related to protein G no 0.12
    12 PP_0535 Outer membrane ferric siderophore receptor no 0.12
    13 PP_5222 adenylate cyclase no 0.12
    14 PP_5406 transposase no 0.12
    15 PP_4986 Channel protein, hemolysin III family 0.31 0.12
    16 PP_0209 ATP-binding taurine transporter subunit no 0.12
    17 PP_0205 putative Oxidoreductase no 0.12
    18 PP_1674 5,6-dimethylbenzimidazole synthase 0.51 0.12
    19 PP_5534 protein of unknown function no 0.12
    20 PP_1155 YaiC/YhcK/ArdA family protein no 0.12

    Or look for negative cofitness