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  • Top cofit genes for PP_0609 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: Type IV fimbrial biogenesis protein PilW
    KEGG: type IV pilus assembly protein PilW

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0506 putative ABC efflux transporter, permease protein no 0.17
    2 PP_3049 conserved protein of unknown function no 0.15
    3 PP_5134 conserved protein of unknown function 0.27 0.14
    4 PP_4946 sodium/L-proline transporter no 0.14
    5 PP_2907 DNA-binding response regulator no 0.14
    6 PP_1262 LysR family transcriptional regulator no 0.14
    7 PP_0270 Sensor histidine kinase no 0.13
    8 PP_0114 methionine ABC transporter ATP-binding protein no 0.13
    9 PP_2761 putative Ribose ABC transporter, permease protein no 0.13
    10 PP_0264 Sensor histidine kinase no 0.13
    11 PP_3044 Phage portal protein, lambda family 0.37 0.13
    12 PP_0174 conserved protein of unknown function no 0.13
    13 PP_1811 UDP-N-acetylglucosamine-2-epimerase 0.52 0.13
    14 PP_4466 Dioxygenase, TauD/TfdA family no 0.13
    15 PP_3983 conserved protein of unknown function no 0.13
    16 PP_2426 coniferyl alcohol dehydrogenase no 0.13
    17 PP_5206 putative translation-related protein no 0.13
    18 PP_2849 urease accessory protein no 0.12
    19 PP_1792 Glycosyl transferase, group 2 family protein no 0.12
    20 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein no 0.12

    Or look for negative cofitness