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  • Top cofit genes for PP_0607 from Pseudomonas putida KT2440

    putative Type IV pili biogenesis protein FimT
    SEED: Type IV fimbrial biogenesis protein FimT
    KEGG: type IV fimbrial biogenesis protein FimT

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0876 Transcriptional regulator, AraC family 0.18 0.23
    2 PP_0885 dipeptide ABC transporter - periplasmic binding protein no 0.19
    3 PP_5561 conserved protein of unknown function no 0.18
    4 PP_3003 3-dehydroquinate dehydratase 3, type II no 0.17
    5 PP_5070 ParA family protein 0.26 0.17
    6 PP_2892 conserved exported protein of unknown function no 0.17
    7 PP_2645 magnesium transporter, ATP-dependent no 0.17
    8 PP_5682 conserved protein of unknown function no 0.17
    9 PP_3710 conserved protein of unknown function no 0.16
    10 PP_3824 conserved exported protein of unknown function no 0.16
    11 PP_5370 Oxidoreductase-related protein no 0.16
    12 PP_1512 conserved protein of unknown function 0.24 0.16
    13 PP_3376 putative phosphonate dehydrogenase no 0.16
    14 PP_4529 conserved protein of unknown function no 0.16
    15 PP_2646 conserved protein of unknown function no 0.15
    16 PP_2693 putative Dipeptidase no 0.15
    17 PP_0506 putative ABC efflux transporter, permease protein 0.30 0.15
    18 PP_2152 glycerophosphoryl diester phosphodiesterase no 0.15
    19 PP_2191 putative Lipoprotein no 0.15
    20 PP_3962 conserved protein of unknown function no 0.15

    Or look for negative cofitness