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  • Top cofit genes for PP_0597 from Pseudomonas putida KT2440

    methylmalonate-semialdehyde dehydrogenase
    SEED: Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
    KEGG: methylmalonate-semialdehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0595 Transcriptional regulator, LysR family 0.96 0.82
    2 PP_0596 Omega-amino acid--pyruvate aminotransferase 0.94 0.68
    3 PP_5271 DNA-binding transcriptional dual regulator, leucine-binding 0.88 0.52
    4 PP_5270 D-amino-acid:quinone oxidoreductase (deaminating) 0.57 0.46
    5 PP_0056 choline dehydrogenase 0.31 0.44
    6 PP_0055 transcriptional regulator 0.61 0.42
    7 PP_0411 Polyamine ABC transporter, ATP-binding protein 0.30 0.35
    8 PP_0412 Polyamine ABC transporter, periplasmic polyamine-binding protein 0.28 0.34
    9 PP_0057 major facilitator family transporter no 0.33
    10 PP_0410 DNA-binding response regulator UhpA 0.88 0.33
    11 PP_0213 succinate-semialdehyde dehydrogenase (NADP+) 0.36 0.30
    12 PP_4547 putative Glutamine synthetase no 0.30
    13 PP_1984 Transcriptional regulator, LysR family 0.72 0.30
    14 PP_5085 malic enzyme B no 0.29
    15 PP_0413 Polyamine ABC transporter, permease protein 0.27 0.28
    16 PP_5262 Probable multidrug resistance protein NorM no 0.28
    17 PP_0414 Polyamine ABC transporter, permease protein 0.67 0.27
    18 PP_4548 putative Oxidoreductase no 0.26
    19 PP_0340 Glutamate-ammonia-ligase adenylyltransferase 0.88 0.26
    20 PP_1842 Glutamine amidotransferase, class I 0.39 0.26

    Or look for negative cofitness