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  • Top cofit genes for PP_0594 from Pseudomonas putida KT2440

    Transcriptional regulator, TetR family
    SEED: Transcriptional regulator RutR of pyrimidine catabolism (TetR family)
    KEGG: TetR/AcrR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0137 glutamate/aspartate-proton DAACS transporter 0.64 0.58
    2 PP_1067 Sensor histidine kinase 0.60 0.57
    3 PP_1066 C4-dicarboxylate transport transcriptional regulatory protein 0.57 0.45
    4 PP_5337 LysR family transcriptional regulator 0.62 0.44
    5 PP_4289 conserved membrane protein of unknown function 0.59 0.37
    6 PP_1071 glutamate / aspartate ABC transporter - periplasmic binding protein 0.65 0.37
    7 PP_0496 Sodium/alanine symporter 0.28 0.35
    8 PP_2379 putative cytochrome oxidase biogenesis protein 0.29 0.35
    9 PP_4941 conserved exported protein of unknown function 0.40 0.34
    10 PP_0498 conserved protein of unknown function no 0.34
    11 PP_1793 Glycosyl transferase, group 2 family protein no 0.33
    12 PP_4946 sodium/L-proline transporter 0.66 0.29
    13 PP_1646 putative Thioredoxin no 0.29
    14 PP_3415 Transcriptional regulator, LacI family no 0.29
    15 PP_0984 conserved membrane protein of unknown function 0.64 0.29
    16 PP_4118 putative Membrane protein no 0.28
    17 PP_2449 conserved protein of unknown function no 0.28
    18 PP_1792 Glycosyl transferase, group 2 family protein no 0.28
    19 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase no 0.28
    20 PP_1786 putative Glycosyl transferase no 0.28

    Or look for negative cofitness