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  • Top cofit genes for PP_0572 from Pseudomonas putida KT2440

    peptidoglycan glycosyltransferase
    SEED: Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C
    KEGG: penicillin-binding protein 1C

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0570 lipoprotein of unknown function 0.85 0.66
    2 PP_5639 conserved exported protein of unknown function no 0.58
    3 PP_4977 5,10-methylenetetrahydrofolate reductase no 0.36
    4 PP_4785 conserved exported protein of unknown function 0.20 0.35
    5 PP_2375 cobalamin-dependent methionine synthase no 0.33
    6 PP_0701 fosmidomycin efflux system 0.36 0.32
    7 PP_2603 conserved protein of unknown function 0.32 0.30
    8 PP_1672 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase no 0.30
    9 PP_3065 Pyocin R2_PP, tail formation no 0.30
    10 PP_1673 cobyrinate a,c-diamide synthase no 0.30
    11 PP_0430 conserved protein of unknown function no 0.29
    12 PP_4696 Nitrogen regulation protein NR(I) no 0.29
    13 PP_4830 precorrin-6Y C(5,15)-methyltransferase no 0.28
    14 PP_0876 Transcriptional regulator, AraC family no 0.28
    15 PP_3417 D-gluconate transporter 0.14 0.28
    16 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase no 0.28
    17 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase no 0.27
    18 PP_4804 RlpA-like lipoprotein 0.15 0.27
    19 PP_1552 putative Phage replication protein no 0.27
    20 PP_2364 conserved protein of unknown function 0.32 0.27

    Or look for negative cofitness