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  • Top cofit genes for PP_0557 from Pseudomonas putida KT2440

    Acetoin catabolism regulatory protein
    SEED: Transcriptional activator of acetoin dehydrogenase operon AcoR

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0553 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system no 0.46
    2 PP_0554 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta no 0.44
    3 PP_0555 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha 0.36 0.42
    4 PP_0556 Acetoin catabolism protein no 0.32
    5 PP_4487 acetyl-CoA synthetase no 0.23
    6 PP_0611 Type IV pili biogenesis protein PilE no 0.20
    7 PP_0612 FAD-dependent glycine/D-amino acid oxidase no 0.19
    8 PP_0552 2,3-butanediol dehydrogenase 0.75 0.17
    9 PP_0534 putative Transcriptional regulator PfeR no 0.16
    10 PP_1657 modified nucleoside triphosphate pyrophosphohydrolase no 0.16
    11 PP_5522 protein of unknown function no 0.16
    12 PP_4843 putative Urea ABC transporter, permease protein no 0.16
    13 PP_3589 serine:H+ symport permease, threonine-insensitive no 0.16
    14 PP_0599 paraquat-inducible protein B no 0.15
    15 PP_0924 conserved protein of unknown function no 0.15
    16 PP_5276 Phospholipase D family protein no 0.14
    17 PP_4530 conserved protein of unknown function no 0.14
    18 PP_2998 2-dehydropantoate 2-reductase no 0.14
    19 PP_1821 Glutathione S-transferase family protein no 0.14
    20 PP_4841 putative Urea ABC transporter, periplasmic protein no 0.14

    Or look for negative cofitness