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  • Top cofit genes for PP_0554 from Pseudomonas putida KT2440

    Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
    SEED: Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)
    KEGG: pyruvate dehydrogenase E1 component subunit beta

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0557 Acetoin catabolism regulatory protein no 0.44
    2 PP_0555 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha no 0.38
    3 PP_0553 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system no 0.26
    4 PP_0599 paraquat-inducible protein B no 0.22
    5 PP_0598 paraquat-inducible protein A no 0.22
    6 PP_0612 FAD-dependent glycine/D-amino acid oxidase no 0.21
    7 PP_5745 paraquat-inducible protein A 0.32 0.20
    8 PP_4487 acetyl-CoA synthetase 0.30 0.18
    9 PP_0556 Acetoin catabolism protein no 0.17
    10 PP_1111 putative Synthetase no 0.14
    11 PP_0611 Type IV pili biogenesis protein PilE no 0.14
    12 PP_3453 putative Sensor protein RstB no 0.14
    13 PP_3029 DNA cytosine methyltransferase family protein no 0.14
    14 PP_4626 holin regulator of murein hydrolases no 0.13
    15 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.13
    16 PP_3454 putative transcriptional regulatory protein no 0.13
    17 PP_1532 putative Phage integrase no 0.13
    18 PP_4897 N-acetylmuramoyl-L-alanine amidase no 0.13
    19 PP_2322 Major outer membrane lipoprotein no 0.13
    20 PP_2323 conserved protein of unknown function no 0.13

    Or look for negative cofitness